Protein–RNA interactions for Protein: Q9ES64

Ush1c, Harmonin, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1cQ9ES64 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ush1cQ9ES64 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Pak4-202ENSMUST00000108283 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ush1cQ9ES64 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Ush1cQ9ES64 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Gm12085-201ENSMUST00000119263 940 ntBASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Il3ra-202ENSMUST00000223589 738 ntBASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Gfra2-202ENSMUST00000227633 1480 ntBASIC17.95■□□□□ 0.46
Ush1cQ9ES64 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ush1cQ9ES64 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Gm38058-201ENSMUST00000194323 4368 ntBASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Gm15565-201ENSMUST00000118890 427 ntBASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Ush1cQ9ES64 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms