Protein–RNA interactions for Protein: Q9D7S1

Tmem54, Transmembrane protein 54, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem54Q9D7S1 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Tmem54Q9D7S1 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Prkcz2-201ENSMUST00000206136 1756 ntBASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 AC161829.1-201ENSMUST00000220298 281 ntBASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Tmem54Q9D7S1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Gm15358-201ENSMUST00000119249 520 ntBASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Tmem54Q9D7S1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Phf21b-203ENSMUST00000159939 3639 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Grk6-207ENSMUST00000225925 2769 ntBASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Tmem54Q9D7S1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms