Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Pfdn1Q9CWM4 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 CT010444.2-201ENSMUST00000217877 1629 ntBASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Pfdn1Q9CWM4 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cdc34b-202ENSMUST00000188741 1252 ntBASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC13.79□□□□□ -0.2
Pfdn1Q9CWM4 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Pfdn1Q9CWM4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Pfdn1Q9CWM4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms