Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gm37153-201ENSMUST00000193637 231 ntBASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 AC174742.1-201ENSMUST00000218272 304 ntBASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC8.4□□□□□ -1.06
Sec61bQ9CQS8 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
Sec61bQ9CQS8 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Mir3113-201ENSMUST00000175478 76 ntBASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gm19164-201ENSMUST00000210667 640 ntBASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 AC117588.1-201ENSMUST00000228510 999 ntBASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
Sec61bQ9CQS8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Dap3-202ENSMUST00000107491 1375 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
Sec61bQ9CQS8 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms