Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Raf1Q99N57 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC14.05□□□□□ -0.16
Raf1Q99N57 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC14.05□□□□□ -0.16
Raf1Q99N57 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Raf1Q99N57 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 App-207ENSMUST00000227737 2827 ntBASIC14.05□□□□□ -0.16
Raf1Q99N57 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Raf1Q99N57 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Raf1Q99N57 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.04□□□□□ -0.16
Raf1Q99N57 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC14.04□□□□□ -0.16
Raf1Q99N57 Gm38327-201ENSMUST00000195852 1755 ntBASIC14.04□□□□□ -0.16
Raf1Q99N57 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Raf1Q99N57 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Mir3081-201ENSMUST00000175305 84 ntBASIC14.03□□□□□ -0.16
Raf1Q99N57 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC14.03□□□□□ -0.16
Raf1Q99N57 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Raf1Q99N57 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC14.03□□□□□ -0.16
Raf1Q99N57 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Raf1Q99N57 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Raf1Q99N57 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Raf1Q99N57 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Raf1Q99N57 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms