Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Chmp1b1Q99LU0 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Chmp1b1Q99LU0 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Chmp1b1Q99LU0 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Chmp1b1Q99LU0 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms