Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Gm2308-201ENSMUST00000166539 1004 ntBASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Gm27525-201ENSMUST00000184465 107 ntBASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC16.2■□□□□ 0.18
Lysmd3Q99LE3 Mob2-206ENSMUST00000211206 2140 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Grk6-207ENSMUST00000225925 2769 ntBASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Gm5364-201ENSMUST00000216789 889 ntBASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Lysmd3Q99LE3 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Lysmd3Q99LE3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Psmb5-202ENSMUST00000227257 622 ntBASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Lysmd3Q99LE3 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.16■□□□□ 0.18
Lysmd3Q99LE3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms