Protein–RNA interactions for Protein: Q99JW4

Lims1, LIM and senescent cell antigen-like-containing domain protein 1, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims1Q99JW4 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Gm1818-201ENSMUST00000169406 1184 ntBASIC14.25□□□□□ -0.13
Lims1Q99JW4 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Lims1Q99JW4 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC14.24□□□□□ -0.13
Lims1Q99JW4 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Lims1Q99JW4 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.22□□□□□ -0.13
Lims1Q99JW4 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Lims1Q99JW4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms