Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Pcdhga6Q91XY2 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Wdyhv1-206ENSMUST00000227142 786 ntBASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Pcdhga6Q91XY2 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Gm26675-201ENSMUST00000181068 1525 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Pcdhga6Q91XY2 Gm9889-202ENSMUST00000206983 1577 ntBASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC15.53■□□□□ 0.08
Pcdhga6Q91XY2 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms