Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Mir5126-201ENSMUST00000175513 77 ntBASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Gm9172-201ENSMUST00000212092 954 ntBASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Ddx41Q91VN6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Gm8655-201ENSMUST00000221159 852 ntBASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Ddx41Q91VN6 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Gm11780-201ENSMUST00000136880 516 ntBASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Mir6404-201ENSMUST00000183699 94 ntBASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.9■□□□□ 0.46
Ddx41Q91VN6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Ddx41Q91VN6 Ccdc166-201ENSMUST00000182172 2584 ntBASIC17.89■□□□□ 0.46
Ddx41Q91VN6 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
Ddx41Q91VN6 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Gm6089-201ENSMUST00000197666 938 ntBASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Gm37912-201ENSMUST00000191895 3076 ntBASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Ddx41Q91VN6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Ddx41Q91VN6 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms