Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 AC127302.2-201ENSMUST00000215212 268 ntBASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Lsm1Q8VC85 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC15□□□□□ -0.01
Lsm1Q8VC85 AC153794.1-201ENSMUST00000169148 126 ntBASIC15□□□□□ -0.01
Lsm1Q8VC85 Gm23634-201ENSMUST00000175071 91 ntBASIC15□□□□□ -0.01
Lsm1Q8VC85 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC15□□□□□ -0.01
Lsm1Q8VC85 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC15□□□□□ -0.01
Lsm1Q8VC85 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Gm7367-201ENSMUST00000057611 492 ntBASIC15□□□□□ -0.01
Lsm1Q8VC85 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Lsm1Q8VC85 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Lsm1Q8VC85 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Gm10584-201ENSMUST00000207036 2628 ntBASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Prkcz2-201ENSMUST00000206136 1756 ntBASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Lsm1Q8VC85 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Gm8784-201ENSMUST00000222096 1435 ntBASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Lsm1Q8VC85 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms