Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Elmo2-202ENSMUST00000074046 3502 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Nup58Q8R332 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nup58Q8R332 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC16.77■□□□□ 0.28
Nup58Q8R332 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Nup58Q8R332 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Nup58Q8R332 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Nup58Q8R332 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Gm17807-201ENSMUST00000186869 298 ntBASIC16.76■□□□□ 0.27
Nup58Q8R332 Gm37722-201ENSMUST00000193757 208 ntBASIC16.76■□□□□ 0.27
Nup58Q8R332 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Nup58Q8R332 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Nup58Q8R332 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup58Q8R332 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nup58Q8R332 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC16.75■□□□□ 0.27
Nup58Q8R332 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC16.75■□□□□ 0.27
Nup58Q8R332 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Nup58Q8R332 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Nup58Q8R332 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Zyx-205ENSMUST00000203401 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Nup58Q8R332 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Mir6404-201ENSMUST00000183699 94 ntBASIC16.74■□□□□ 0.27
Nup58Q8R332 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Hist1h2ab-201ENSMUST00000078369 473 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Gm44443-201ENSMUST00000204396 5633 ntBASIC16.74■□□□□ 0.27
Nup58Q8R332 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Nup58Q8R332 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nup58Q8R332 Safb-201ENSMUST00000095224 3106 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Nup58Q8R332 AL691505.1-201ENSMUST00000219965 1618 ntTSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms