Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Lhpp-201ENSMUST00000033241 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Sf3a1Q8K4Z5 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Gm13884-201ENSMUST00000118103 829 ntBASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Gm13418-201ENSMUST00000119097 944 ntBASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 AC127302.2-201ENSMUST00000215212 268 ntBASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Sf3a1Q8K4Z5 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC19.12■□□□□ 0.65
Sf3a1Q8K4Z5 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Gm18856-201ENSMUST00000178096 1374 ntBASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Zfp524-202ENSMUST00000207901 1263 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 AC164629.2-201ENSMUST00000217916 270 ntBASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Gm37812-201ENSMUST00000195216 2475 ntBASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Sf3a1Q8K4Z5 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Gm26613-201ENSMUST00000180919 1457 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Gm7862-201ENSMUST00000121461 292 ntBASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a1Q8K4Z5 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a1Q8K4Z5 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms