Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Clrn1Q8K445 Ddx39-201ENSMUST00000019576 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Sybu-209ENSMUST00000228639 4113 ntBASIC14.77□□□□□ -0.04
Clrn1Q8K445 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Acbd5-204ENSMUST00000114529 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Clrn1Q8K445 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.77□□□□□ -0.05
Clrn1Q8K445 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clrn1Q8K445 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Clrn1Q8K445 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Clrn1Q8K445 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC14.75□□□□□ -0.05
Clrn1Q8K445 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.75□□□□□ -0.05
Clrn1Q8K445 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Gm4459-201ENSMUST00000118750 468 ntBASIC14.75□□□□□ -0.05
Clrn1Q8K445 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Pde4d-208ENSMUST00000120671 2455 ntTSL 5 BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Clrn1Q8K445 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gimap3-201ENSMUST00000038811 1968 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Clrn1Q8K445 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms