Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm9947-201ENSMUST00000067599 2920 ntBASIC9.87□□□□□ -0.83
Cystm1Q8K353 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Gm19863-201ENSMUST00000192480 2218 ntBASIC9.87□□□□□ -0.83
Cystm1Q8K353 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
Cystm1Q8K353 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC9.86□□□□□ -0.83
Cystm1Q8K353 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Gm4974-201ENSMUST00000209974 875 ntBASIC9.86□□□□□ -0.83
Cystm1Q8K353 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC9.86□□□□□ -0.83
Cystm1Q8K353 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Matn2-206ENSMUST00000228570 2798 ntBASIC9.86□□□□□ -0.83
Cystm1Q8K353 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.86□□□□□ -0.83
Cystm1Q8K353 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Gm29791-202ENSMUST00000207888 369 ntBASIC9.85□□□□□ -0.83
Cystm1Q8K353 AC159205.6-201ENSMUST00000224935 887 ntBASIC9.85□□□□□ -0.83
Cystm1Q8K353 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC9.85□□□□□ -0.83
Cystm1Q8K353 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC9.85□□□□□ -0.83
Cystm1Q8K353 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Cystm1Q8K353 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC9.84□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms