Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Gm16011-201ENSMUST00000121567 2662 ntBASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Rtn1Q8K0T0 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Gadd45gip1-201ENSMUST00000036734 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Rtn1Q8K0T0 Tm9sf1-203ENSMUST00000121791 2148 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Rtn1Q8K0T0 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Rtn1Q8K0T0 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Pdlim5-212ENSMUST00000200043 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Grk6-207ENSMUST00000225925 2769 ntBASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Gm6376-201ENSMUST00000209407 580 ntBASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Rps4l-201ENSMUST00000071745 943 ntBASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Rtn1Q8K0T0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Gm13337-201ENSMUST00000119183 1594 ntBASIC18■□□□□ 0.47
Rtn1Q8K0T0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC18■□□□□ 0.47
Rtn1Q8K0T0 Gm27646-201ENSMUST00000183989 110 ntBASIC18■□□□□ 0.47
Rtn1Q8K0T0 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC18■□□□□ 0.47
Rtn1Q8K0T0 AC093926.2-201ENSMUST00000214468 1228 ntBASIC18■□□□□ 0.47
Rtn1Q8K0T0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Rtn1Q8K0T0 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms