Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Trim52Q8CDV4 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Gm44335-201ENSMUST00000196879 141 ntBASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Gm44297-201ENSMUST00000198304 141 ntBASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Gm44346-201ENSMUST00000198851 141 ntBASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Gpr146-202ENSMUST00000053120 1040 ntBASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim52Q8CDV4 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Trim52Q8CDV4 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Gm13410-201ENSMUST00000117058 1415 ntBASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 AC153526.5-201ENSMUST00000218661 2147 ntBASIC19.19■□□□□ 0.66
Trim52Q8CDV4 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.19■□□□□ 0.66
Trim52Q8CDV4 Gm45293-201ENSMUST00000209754 1812 ntBASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Max-202ENSMUST00000110395 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Gm19430-201ENSMUST00000193847 2137 ntBASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim52Q8CDV4 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim52Q8CDV4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms