Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Syngr3-201ENSMUST00000007236 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44357-201ENSMUST00000195897 142 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm19658-201ENSMUST00000196231 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44367-201ENSMUST00000196836 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44350-201ENSMUST00000197197 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44390-201ENSMUST00000197533 144 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44313-201ENSMUST00000198018 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44486-201ENSMUST00000198508 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44314-201ENSMUST00000199263 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44394-201ENSMUST00000199558 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44484-201ENSMUST00000199873 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44466-201ENSMUST00000200264 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm44359-201ENSMUST00000200671 138 ntBASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps53Q8CCB4 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Gm8000-201ENSMUST00000188378 592 ntBASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Gpank1-201ENSMUST00000052167 1295 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Serpine2-201ENSMUST00000027467 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps53Q8CCB4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Gm42473-201ENSMUST00000201056 2291 ntBASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 AC132265.1-201ENSMUST00000219233 1665 ntBASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps53Q8CCB4 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC18.14■□□□□ 0.5
Vps53Q8CCB4 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Gm12350-201ENSMUST00000121208 462 ntBASIC18.14■□□□□ 0.49
Vps53Q8CCB4 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms