Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm9949Q8C9F4 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm9949Q8C9F4 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Gm9949Q8C9F4 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Gm9949Q8C9F4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Gm9949Q8C9F4 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm4459-201ENSMUST00000118750 468 ntBASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm28033-201ENSMUST00000184224 96 ntBASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm10819-201ENSMUST00000099988 561 ntBASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Gm9949Q8C9F4 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm9949Q8C9F4 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.43
Gm9949Q8C9F4 Gm7669-201ENSMUST00000210184 1603 ntBASIC12.33□□□□□ -0.43
Gm9949Q8C9F4 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm9949Q8C9F4 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Gm9949Q8C9F4 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Gm12644-201ENSMUST00000119935 606 ntBASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Gm9172-201ENSMUST00000212092 954 ntBASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Gm9949Q8C9F4 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms