Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Gm8097-201ENSMUST00000117903 829 ntBASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim9Q8C7M3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Gm9103-201ENSMUST00000119371 405 ntBASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Gm8344-201ENSMUST00000119813 856 ntBASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Stk11-202ENSMUST00000105370 1474 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Trim9Q8C7M3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Grk6-207ENSMUST00000225925 2769 ntBASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Slc41a3-202ENSMUST00000044019 2412 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Raet1e-204ENSMUST00000181645 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Trim9Q8C7M3 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Ldha-210ENSMUST00000209984 1815 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 BC037039-201ENSMUST00000192003 2205 ntBASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Trim9Q8C7M3 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Gm14722-201ENSMUST00000118943 689 ntBASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC17.21■□□□□ 0.35
Trim9Q8C7M3 Gm34391-201ENSMUST00000203706 907 ntBASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms