Protein–RNA interactions for Protein: Q8C4X2

Csnk1g3, Casein kinase I isoform gamma-3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1g3Q8C4X2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Gm10499-201ENSMUST00000174094 934 ntBASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Gm43474-201ENSMUST00000196415 774 ntBASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Csnk1g3Q8C4X2 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Csnk1g3Q8C4X2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Csnk1g3Q8C4X2 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 AA543401-201ENSMUST00000164248 1269 ntBASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Csnk1g3Q8C4X2 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 AC130669.1-201ENSMUST00000228537 1672 ntBASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Gm14057-201ENSMUST00000120631 482 ntBASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Csnk1g3Q8C4X2 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms