Protein–RNA interactions for Protein: Q8C196

Cps1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, mousemouse

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cps1Q8C196 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Cps1Q8C196 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC20.83■□□□□ 0.93
Cps1Q8C196 AC121598.2-201ENSMUST00000228376 2325 ntBASIC20.83■□□□□ 0.92
Cps1Q8C196 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Cps1Q8C196 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC20.83■□□□□ 0.92
Cps1Q8C196 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC20.83■□□□□ 0.92
Cps1Q8C196 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Gm18766-201ENSMUST00000189811 808 ntBASIC20.83■□□□□ 0.92
Cps1Q8C196 Gm7730-201ENSMUST00000212486 454 ntBASIC20.83■□□□□ 0.92
Cps1Q8C196 Gm9063-201ENSMUST00000223299 582 ntBASIC20.83■□□□□ 0.92
Cps1Q8C196 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC20.83■□□□□ 0.92
Cps1Q8C196 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC20.83■□□□□ 0.92
Cps1Q8C196 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cps1Q8C196 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.82■□□□□ 0.92
Cps1Q8C196 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Cps1Q8C196 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cps1Q8C196 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
Cps1Q8C196 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Cps1Q8C196 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Cps1Q8C196 Gm27533-201ENSMUST00000183800 152 ntBASIC20.82■□□□□ 0.92
Cps1Q8C196 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cps1Q8C196 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Cps1Q8C196 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cps1Q8C196 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cps1Q8C196 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cps1Q8C196 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Cps1Q8C196 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Gm7488-201ENSMUST00000117148 684 ntBASIC20.81■□□□□ 0.92
Cps1Q8C196 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC20.81■□□□□ 0.92
Cps1Q8C196 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC20.81■□□□□ 0.92
Cps1Q8C196 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Cps1Q8C196 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.8■□□□□ 0.92
Cps1Q8C196 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Cps1Q8C196 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
Cps1Q8C196 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Cps1Q8C196 Gm26596-201ENSMUST00000180464 2655 ntBASIC20.79■□□□□ 0.92
Cps1Q8C196 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC20.79■□□□□ 0.92
Cps1Q8C196 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC20.79■□□□□ 0.92
Cps1Q8C196 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 AC131743.5-201ENSMUST00000220775 1618 ntBASIC20.79■□□□□ 0.92
Cps1Q8C196 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cps1Q8C196 Gm43072-201ENSMUST00000200283 1671 ntBASIC20.79■□□□□ 0.92
Cps1Q8C196 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Gm24694-201ENSMUST00000180054 110 ntBASIC20.78■□□□□ 0.92
Cps1Q8C196 Gm27663-201ENSMUST00000184839 110 ntBASIC20.78■□□□□ 0.92
Cps1Q8C196 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cps1Q8C196 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
Cps1Q8C196 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC20.78■□□□□ 0.92
Cps1Q8C196 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC20.78■□□□□ 0.92
Cps1Q8C196 AC164567.1-201ENSMUST00000219185 960 ntBASIC20.78■□□□□ 0.92
Cps1Q8C196 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Cps1Q8C196 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms