Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps9d1Q8C190 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm11355-201ENSMUST00000121120 306 ntBASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gm6858-201ENSMUST00000208582 1468 ntBASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Vps9d1Q8C190 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gm33142-201ENSMUST00000193913 867 ntBASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 AC132265.1-201ENSMUST00000219233 1665 ntBASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Vps9d1Q8C190 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Nrbf2-201ENSMUST00000077839 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Vps9d1Q8C190 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 57.3 ms