Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Gm28630-201ENSMUST00000187806 498 ntBASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Col16a1Q8BLX7 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Gm9824-201ENSMUST00000178707 561 ntBASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Ntrk2-205ENSMUST00000224402 2284 ntBASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Col16a1Q8BLX7 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Gm17837-201ENSMUST00000186435 985 ntBASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC20.3■□□□□ 0.84
Col16a1Q8BLX7 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gm18737-201ENSMUST00000173594 937 ntBASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gm27989-201ENSMUST00000184721 107 ntBASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Gm6888-201ENSMUST00000221983 706 ntBASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Col16a1Q8BLX7 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Zfp13-202ENSMUST00000115516 2104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Gm14719-201ENSMUST00000121891 340 ntBASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC20.28■□□□□ 0.84
Col16a1Q8BLX7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Gm7488-201ENSMUST00000117148 684 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Gm16026-204ENSMUST00000162652 683 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Gm25144-201ENSMUST00000179561 110 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Gm25352-201ENSMUST00000179815 110 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Gm27680-201ENSMUST00000184192 160 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Col16a1Q8BLX7 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms