Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Srrm4Q8BKA3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Gm5864-201ENSMUST00000202263 970 ntBASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Traf2-202ENSMUST00000114234 2151 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Gm42473-201ENSMUST00000201056 2291 ntBASIC13.55□□□□□ -0.24
Srrm4Q8BKA3 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Gm4459-201ENSMUST00000118750 468 ntBASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Gm12497-201ENSMUST00000138778 237 ntBASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Rbfox2-207ENSMUST00000227533 1041 ntBASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Srrm4Q8BKA3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Rbfox2-206ENSMUST00000227314 1810 ntBASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Golph3-201ENSMUST00000059680 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Gm28659-201ENSMUST00000188013 759 ntBASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Srrm4Q8BKA3 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Srrm4Q8BKA3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms