Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Pcdh20Q8BIZ0 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Olfr129-201ENSMUST00000122318 993 ntBASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Gm10052-201ENSMUST00000168019 960 ntBASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Gm7729-201ENSMUST00000050143 801 ntBASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Pcdh20Q8BIZ0 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gm44729-201ENSMUST00000206759 2052 ntBASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Pcdh20Q8BIZ0 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Gm28033-201ENSMUST00000184224 96 ntBASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Pcdh20Q8BIZ0 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 AC163637.1-201ENSMUST00000215491 1894 ntBASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Pcdh20Q8BIZ0 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Pcdh20Q8BIZ0 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms