Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npas4Q8BGD7 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Npas4Q8BGD7 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Gm9385-201ENSMUST00000117563 472 ntBASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Gm14722-201ENSMUST00000118943 689 ntBASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Gm25948-201ENSMUST00000175334 112 ntBASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Gm2272-201ENSMUST00000194903 582 ntBASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 AC126250.1-201ENSMUST00000228343 1768 ntBASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Plscr3-202ENSMUST00000108632 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Npas4Q8BGD7 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
Npas4Q8BGD7 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Prkcz2-201ENSMUST00000206136 1756 ntBASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Npas4Q8BGD7 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Npas4Q8BGD7 Gm7669-201ENSMUST00000210184 1603 ntBASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Gm38327-201ENSMUST00000195852 1755 ntBASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Npas4Q8BGD7 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms