Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm7229-201ENSMUST00000214719 1007 ntBASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Prpf40bQ80W14 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC18■□□□□ 0.47
Prpf40bQ80W14 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18■□□□□ 0.47
Prpf40bQ80W14 Gm17271-201ENSMUST00000165535 355 ntBASIC18■□□□□ 0.47
Prpf40bQ80W14 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Gm44945-201ENSMUST00000206764 1187 ntBASIC18■□□□□ 0.47
Prpf40bQ80W14 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC18■□□□□ 0.47
Prpf40bQ80W14 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC18■□□□□ 0.47
Prpf40bQ80W14 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC18■□□□□ 0.47
Prpf40bQ80W14 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Prpf40bQ80W14 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Phb2-201ENSMUST00000004375 1318 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Prpf40bQ80W14 Gm11873-201ENSMUST00000117877 1304 ntBASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Prpf40bQ80W14 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 AA543401-201ENSMUST00000164248 1269 ntBASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Gm5253-201ENSMUST00000187104 1025 ntBASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 AC159106.1-201ENSMUST00000224421 690 ntBASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Prpf40bQ80W14 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms