Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Gm18733-201ENSMUST00000173950 856 ntBASIC16.16■□□□□ 0.18
Trim62Q80V85 Gm7286-201ENSMUST00000182691 1007 ntBASIC16.16■□□□□ 0.18
Trim62Q80V85 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC16.16■□□□□ 0.18
Trim62Q80V85 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim62Q80V85 AV026068-213ENSMUST00000223675 1171 ntBASIC16.16■□□□□ 0.18
Trim62Q80V85 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trim62Q80V85 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Tgfb1i1-207ENSMUST00000167965 1746 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC16.16■□□□□ 0.18
Trim62Q80V85 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.16■□□□□ 0.18
Trim62Q80V85 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trim62Q80V85 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Cadps2-205ENSMUST00000115358 4848 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Gm37153-201ENSMUST00000193637 231 ntBASIC16.15■□□□□ 0.18
Trim62Q80V85 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trim62Q80V85 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trim62Q80V85 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim62Q80V85 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
Trim62Q80V85 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim62Q80V85 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Trim62Q80V85 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC16.14■□□□□ 0.17
Trim62Q80V85 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Trim62Q80V85 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Trim62Q80V85 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.14■□□□□ 0.17
Trim62Q80V85 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.13■□□□□ 0.17
Trim62Q80V85 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim62Q80V85 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim62Q80V85 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Trim62Q80V85 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim62Q80V85 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Trim62Q80V85 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Trim62Q80V85 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms