Protein–RNA interactions for Protein: Q6PE54

Dhx40, Probable ATP-dependent RNA helicase DHX40, mousemouse

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dhx40Q6PE54 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Gm2788-204ENSMUST00000209288 1966 ntTSL 5 BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Dhx40Q6PE54 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Gm11355-201ENSMUST00000121120 306 ntBASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Gm18101-201ENSMUST00000215769 548 ntBASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Dhx40Q6PE54 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Prkcz2-201ENSMUST00000206136 1756 ntBASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Dhx40Q6PE54 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Gm10013-201ENSMUST00000106074 672 ntBASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 AC114585.2-202ENSMUST00000228094 426 ntBASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Dhx40Q6PE54 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Dhx40Q6PE54 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms