Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Gm8396-201ENSMUST00000057361 823 ntBASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Trim37Q6PCX9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Trim37Q6PCX9 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Gm11780-201ENSMUST00000136880 516 ntBASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 AA543401-201ENSMUST00000164248 1269 ntBASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Trim37Q6PCX9 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Trim37Q6PCX9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Trim37Q6PCX9 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Trim37Q6PCX9 Gm20949-201ENSMUST00000206478 952 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms