Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Clcn1Q64347 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clcn1Q64347 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Gm13365-201ENSMUST00000121188 973 ntBASIC19.73■□□□□ 0.75
Clcn1Q64347 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Gm7787-201ENSMUST00000216858 688 ntBASIC19.73■□□□□ 0.75
Clcn1Q64347 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clcn1Q64347 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Clcn1Q64347 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Gm5177-201ENSMUST00000183092 997 ntBASIC19.72■□□□□ 0.75
Clcn1Q64347 Mir6956-201ENSMUST00000183598 62 ntBASIC19.72■□□□□ 0.75
Clcn1Q64347 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Clcn1Q64347 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Slc39a14-201ENSMUST00000022688 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Cd151-201ENSMUST00000058746 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clcn1Q64347 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC19.71■□□□□ 0.75
Clcn1Q64347 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Gm18489-201ENSMUST00000172565 551 ntBASIC19.71■□□□□ 0.75
Clcn1Q64347 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Gm19164-201ENSMUST00000210667 640 ntBASIC19.71■□□□□ 0.75
Clcn1Q64347 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 9230020A06Rik-203ENSMUST00000214621 1682 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Gm13294-201ENSMUST00000121757 1330 ntBASIC19.71■□□□□ 0.75
Clcn1Q64347 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clcn1Q64347 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clcn1Q64347 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gm42790-201ENSMUST00000201268 969 ntBASIC19.7■□□□□ 0.74
Clcn1Q64347 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Clcn1Q64347 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Clcn1Q64347 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms