Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Zfp248Q640N4 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Gm37812-201ENSMUST00000195216 2475 ntBASIC11.91□□□□□ -0.5
Zfp248Q640N4 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Gm6345-202ENSMUST00000180900 204 ntBASIC11.91□□□□□ -0.5
Zfp248Q640N4 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.91□□□□□ -0.5
Zfp248Q640N4 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Zfp248Q640N4 Kcnq2-220ENSMUST00000197015 8031 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Asic1-205ENSMUST00000228185 1818 ntBASIC11.9□□□□□ -0.5
Zfp248Q640N4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC11.9□□□□□ -0.5
Zfp248Q640N4 Gm17808-201ENSMUST00000200859 894 ntBASIC11.9□□□□□ -0.5
Zfp248Q640N4 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC11.9□□□□□ -0.5
Zfp248Q640N4 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Gm8258-201ENSMUST00000055593 1449 ntBASIC11.9□□□□□ -0.5
Zfp248Q640N4 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Elavl3-203ENSMUST00000215901 3037 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Zfp248Q640N4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.9□□□□□ -0.51
Zfp248Q640N4 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Zfp248Q640N4 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Zfp248Q640N4 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Zfp248Q640N4 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
Zfp248Q640N4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Idh2-201ENSMUST00000107384 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Zfp248Q640N4 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms