Protein–RNA interactions for Protein: Q61735

Cd47, Leukocyte surface antigen CD47, mousemouse

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd47Q61735 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd47Q61735 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd47Q61735 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd47Q61735 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Cd47Q61735 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Cd47Q61735 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd47Q61735 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Cd47Q61735 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Ate1-203ENSMUST00000094017 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Cd47Q61735 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Cd47Q61735 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cd47Q61735 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Cd47Q61735 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Cd47Q61735 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC14.27□□□□□ -0.13
Cd47Q61735 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC14.27□□□□□ -0.13
Cd47Q61735 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Cd47Q61735 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Cd47Q61735 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Cd47Q61735 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.26□□□□□ -0.13
Cd47Q61735 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Bpifb3-202ENSMUST00000109760 1741 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Cd47Q61735 App-207ENSMUST00000227737 2827 ntBASIC14.26□□□□□ -0.13
Cd47Q61735 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Cd47Q61735 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Gm8258-201ENSMUST00000055593 1449 ntBASIC14.25□□□□□ -0.13
Cd47Q61735 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC14.25□□□□□ -0.13
Cd47Q61735 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 AC121577.1-201ENSMUST00000227302 707 ntBASIC14.25□□□□□ -0.13
Cd47Q61735 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Cd47Q61735 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
Cd47Q61735 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 2810039B14Rik-201ENSMUST00000183928 1459 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Cd47Q61735 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Cd47Q61735 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Cd47Q61735 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Cd47Q61735 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Cd47Q61735 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.24□□□□□ -0.13
Cd47Q61735 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms