Protein–RNA interactions for Protein: Q61124

Cln3, Battenin, mousemouse

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln3Q61124 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.07■□□□□ 0.32
Cln3Q61124 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC17.07■□□□□ 0.32
Cln3Q61124 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cln3Q61124 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Gm29179-208ENSMUST00000190450 1137 ntTSL 5 BASIC17.07■□□□□ 0.32
Cln3Q61124 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC17.07■□□□□ 0.32
Cln3Q61124 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cln3Q61124 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Cln3Q61124 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.07■□□□□ 0.32
Cln3Q61124 Vill-207ENSMUST00000141185 1645 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cln3Q61124 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Cln3Q61124 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC17.06■□□□□ 0.32
Cln3Q61124 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC17.06■□□□□ 0.32
Cln3Q61124 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC17.06■□□□□ 0.32
Cln3Q61124 Gm6018-201ENSMUST00000216090 1306 ntBASIC17.06■□□□□ 0.32
Cln3Q61124 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC17.06■□□□□ 0.32
Cln3Q61124 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC17.06■□□□□ 0.32
Cln3Q61124 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cln3Q61124 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cln3Q61124 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.05■□□□□ 0.32
Cln3Q61124 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Mir449b-201ENSMUST00000104833 80 ntBASIC17.05■□□□□ 0.32
Cln3Q61124 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC17.05■□□□□ 0.32
Cln3Q61124 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Cln3Q61124 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC17.05■□□□□ 0.32
Cln3Q61124 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC17.05■□□□□ 0.32
Cln3Q61124 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Cln3Q61124 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.05■□□□□ 0.32
Cln3Q61124 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.05■□□□□ 0.32
Cln3Q61124 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cln3Q61124 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cln3Q61124 Gm14722-201ENSMUST00000118943 689 ntBASIC17.04■□□□□ 0.32
Cln3Q61124 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC17.04■□□□□ 0.32
Cln3Q61124 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Cln3Q61124 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC17.04■□□□□ 0.32
Cln3Q61124 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.04■□□□□ 0.32
Cln3Q61124 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC17.04■□□□□ 0.32
Cln3Q61124 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cln3Q61124 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC17.03■□□□□ 0.32
Cln3Q61124 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cln3Q61124 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC17.03■□□□□ 0.32
Cln3Q61124 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms