Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Gm14523-201ENSMUST00000117260 558 ntBASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC10.59□□□□□ -0.71
Trav3-1Q5R1I8 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Gm14780-201ENSMUST00000118387 2737 ntBASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
Trav3-1Q5R1I8 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Astl-204ENSMUST00000179618 2236 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Gm43272-201ENSMUST00000200599 1584 ntBASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Trav3-1Q5R1I8 Hbegf-201ENSMUST00000025363 2373 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms