Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav6d-4Q5R1I0 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Wnt5b-202ENSMUST00000118120 2115 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm11764-201ENSMUST00000120221 623 ntBASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm5682-201ENSMUST00000173402 505 ntBASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm27628-201ENSMUST00000184911 107 ntBASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav6d-4Q5R1I0 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Ptprs-211ENSMUST00000223859 5588 ntBASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 9530082P21Rik-202ENSMUST00000181291 1798 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Gm5364-201ENSMUST00000216789 889 ntBASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav6d-4Q5R1I0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms