Protein–RNA interactions for Protein: Q4ACU6

Shank3, SH3 and multiple ankyrin repeat domains protein 3, mousemouse

Predictions only

Length 1,730 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank3Q4ACU6 Gm12490-201ENSMUST00000120255 560 ntBASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Shank3Q4ACU6 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gm24694-201ENSMUST00000180054 110 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gm27533-201ENSMUST00000183800 152 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gm27663-201ENSMUST00000184839 110 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 CT009510.1-201ENSMUST00000227972 270 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gm14767-201ENSMUST00000121559 586 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Shank3Q4ACU6 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Shank3Q4ACU6 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Wnt5b-201ENSMUST00000117171 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Shank3Q4ACU6 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 AC155729.1-201ENSMUST00000227758 544 ntBASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm11543-201ENSMUST00000120758 370 ntBASIC19.22■□□□□ 0.67
Shank3Q4ACU6 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Gm18766-201ENSMUST00000189811 808 ntBASIC19.22■□□□□ 0.67
Shank3Q4ACU6 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Shank3Q4ACU6 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Gm3365-201ENSMUST00000216296 1480 ntBASIC19.21■□□□□ 0.67
Shank3Q4ACU6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 AC124732.1-201ENSMUST00000221551 910 ntBASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Gm13517-201ENSMUST00000120782 1495 ntBASIC19.21■□□□□ 0.67
Shank3Q4ACU6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Shank3Q4ACU6 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms