Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Gm10013-201ENSMUST00000106074 672 ntBASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Mir1668-201ENSMUST00000184114 107 ntBASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Gm10605-202ENSMUST00000183019 3198 ntBASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Pcbp3-206ENSMUST00000168465 1748 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Shisa3Q3UPR0 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Shisa3Q3UPR0 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Shisa3Q3UPR0 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gm3272-201ENSMUST00000181181 1229 ntBASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gm10566-201ENSMUST00000086739 996 ntBASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Shisa3Q3UPR0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.5□□□□□ -0.25
Shisa3Q3UPR0 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms