Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm25990-201ENSMUST00000102440 86 ntBASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm25925-201ENSMUST00000158314 306 ntBASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm43073-201ENSMUST00000198200 1189 ntBASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 AC154527.4-201ENSMUST00000224364 1667 ntBASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Khdc4Q3TCX3 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Khdc4Q3TCX3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Lmo4-202ENSMUST00000121112 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Gm7230-201ENSMUST00000173026 815 ntBASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Gm36967-201ENSMUST00000193814 266 ntBASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Khdc4Q3TCX3 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Khdc4Q3TCX3 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 112 ms