Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.43■□□□□ 0.22
Cul4aQ3TCH7 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Cul4aQ3TCH7 Prkag1-201ENSMUST00000168846 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Gm17808-201ENSMUST00000200859 894 ntBASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
Cul4aQ3TCH7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gm37812-201ENSMUST00000195216 2475 ntBASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gm29518-201ENSMUST00000190858 372 ntBASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Flywch1-202ENSMUST00000086325 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gm15998-201ENSMUST00000135144 1844 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.4■□□□□ 0.22
Cul4aQ3TCH7 Tle2-205ENSMUST00000135211 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Cul4aQ3TCH7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.39■□□□□ 0.21
Cul4aQ3TCH7 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms