Protein–RNA interactions for Protein: Q01705

Notch1, Neurogenic locus notch homolog protein 1, mousemouse

Predictions only

Length 2,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch1Q01705 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.29□□□□□ -0.6
Notch1Q01705 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch1Q01705 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Notch1Q01705 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Gm13294-201ENSMUST00000121757 1330 ntBASIC11.29□□□□□ -0.6
Notch1Q01705 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC11.29□□□□□ -0.6
Notch1Q01705 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Gm12490-201ENSMUST00000120255 560 ntBASIC11.29□□□□□ -0.6
Notch1Q01705 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.29□□□□□ -0.6
Notch1Q01705 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC11.29□□□□□ -0.6
Notch1Q01705 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC11.29□□□□□ -0.6
Notch1Q01705 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.29□□□□□ -0.6
Notch1Q01705 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC11.29□□□□□ -0.6
Notch1Q01705 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Notch1Q01705 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC11.28□□□□□ -0.6
Notch1Q01705 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC11.28□□□□□ -0.6
Notch1Q01705 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Notch1Q01705 Gm17837-201ENSMUST00000186435 985 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Notch1Q01705 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Notch1Q01705 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC11.28□□□□□ -0.6
Notch1Q01705 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Gm11453-201ENSMUST00000117318 1007 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 Gm13453-201ENSMUST00000118708 357 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.28□□□□□ -0.6
Notch1Q01705 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 AC155729.1-201ENSMUST00000227758 544 ntBASIC11.28□□□□□ -0.6
Notch1Q01705 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Notch1Q01705 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Notch1Q01705 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Notch1Q01705 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Notch1Q01705 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Notch1Q01705 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Notch1Q01705 Dmrtb1-201ENSMUST00000069271 1861 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
Notch1Q01705 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Notch1Q01705 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Notch1Q01705 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch1Q01705 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC11.27□□□□□ -0.61
Notch1Q01705 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.27□□□□□ -0.61
Notch1Q01705 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Sybu-209ENSMUST00000228639 4113 ntBASIC11.27□□□□□ -0.61
Notch1Q01705 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch1Q01705 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC11.27□□□□□ -0.61
Notch1Q01705 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Notch1Q01705 Rpph1-201ENSMUST00000175096 319 ntBASIC11.27□□□□□ -0.61
Notch1Q01705 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Notch1Q01705 Gm18057-201ENSMUST00000208220 503 ntBASIC11.27□□□□□ -0.61
Notch1Q01705 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch1Q01705 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Notch1Q01705 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Notch1Q01705 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms