Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC19.51■□□□□ 0.71
Smarcc1P97496 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Smarcc1P97496 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc1P97496 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Smarcc1P97496 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Smarcc1P97496 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Gm12428-201ENSMUST00000119844 727 ntBASIC19.5■□□□□ 0.71
Smarcc1P97496 Gm24158-201ENSMUST00000175263 71 ntBASIC19.5■□□□□ 0.71
Smarcc1P97496 Gm5745-201ENSMUST00000183748 313 ntBASIC19.5■□□□□ 0.71
Smarcc1P97496 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Smarcc1P97496 Gm43338-201ENSMUST00000198617 2223 ntBASIC19.49■□□□□ 0.71
Smarcc1P97496 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC19.49■□□□□ 0.71
Smarcc1P97496 AC157650.3-201ENSMUST00000225058 1476 ntBASIC19.49■□□□□ 0.71
Smarcc1P97496 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Haglr-201ENSMUST00000100000 2085 ntBASIC19.49■□□□□ 0.71
Smarcc1P97496 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarcc1P97496 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC19.49■□□□□ 0.71
Smarcc1P97496 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC19.49■□□□□ 0.71
Smarcc1P97496 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Smarcc1P97496 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Gm6598-201ENSMUST00000202719 2615 ntBASIC19.49■□□□□ 0.71
Smarcc1P97496 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.49■□□□□ 0.71
Smarcc1P97496 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Smarcc1P97496 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC19.48■□□□□ 0.71
Smarcc1P97496 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Mir6977-201ENSMUST00000184960 64 ntBASIC19.48■□□□□ 0.71
Smarcc1P97496 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Arhgef33-209ENSMUST00000225223 714 ntBASIC19.48■□□□□ 0.71
Smarcc1P97496 CT025555.1-201ENSMUST00000225901 1217 ntBASIC19.48■□□□□ 0.71
Smarcc1P97496 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Smarcc1P97496 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC19.48■□□□□ 0.71
Smarcc1P97496 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm8839-201ENSMUST00000121279 1645 ntBASIC19.47■□□□□ 0.71
Smarcc1P97496 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC19.47■□□□□ 0.71
Smarcc1P97496 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC19.47■□□□□ 0.71
Smarcc1P97496 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Smarcc1P97496 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC19.47■□□□□ 0.71
Smarcc1P97496 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms