Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Cacna1aP97445 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacna1aP97445 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Gm7336-201ENSMUST00000107041 1232 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 Gm13365-201ENSMUST00000121188 973 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.39□□□□□ -0.11
Cacna1aP97445 Gm18246-201ENSMUST00000221023 728 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.39□□□□□ -0.11
Cacna1aP97445 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Cacna1aP97445 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.38□□□□□ -0.11
Cacna1aP97445 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Spdef-201ENSMUST00000025054 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.38□□□□□ -0.11
Cacna1aP97445 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC14.38□□□□□ -0.11
Cacna1aP97445 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Cacna1aP97445 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Cacna1aP97445 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Gm20553-201ENSMUST00000204205 844 ntBASIC14.37□□□□□ -0.11
Cacna1aP97445 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Brsk2-202ENSMUST00000075528 2160 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Gm9385-201ENSMUST00000117563 472 ntBASIC14.37□□□□□ -0.11
Cacna1aP97445 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.37□□□□□ -0.11
Cacna1aP97445 Gm43433-201ENSMUST00000196573 481 ntBASIC14.37□□□□□ -0.11
Cacna1aP97445 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.37□□□□□ -0.11
Cacna1aP97445 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Cacna1aP97445 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.36□□□□□ -0.11
Cacna1aP97445 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.36□□□□□ -0.11
Cacna1aP97445 Gm6257-201ENSMUST00000163864 910 ntBASIC14.36□□□□□ -0.11
Cacna1aP97445 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.36□□□□□ -0.11
Cacna1aP97445 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Cacna1aP97445 Zfp42-202ENSMUST00000209356 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cacna1aP97445 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms