Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.33■□□□□ 0.04
Lhx1P63006 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 Gm5253-201ENSMUST00000187104 1025 ntBASIC15.33■□□□□ 0.04
Lhx1P63006 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lhx1P63006 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 Neu4-202ENSMUST00000190212 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Lhx1P63006 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Lhx1P63006 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC15.33■□□□□ 0.04
Lhx1P63006 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Lhx1P63006 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Snn-201ENSMUST00000089011 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Prkcz2-201ENSMUST00000206136 1756 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 Gm14140-201ENSMUST00000119999 995 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 BC028777-201ENSMUST00000137883 985 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC15.32■□□□□ 0.04
Lhx1P63006 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 AC151836.1-202ENSMUST00000226259 753 ntBASIC15.32■□□□□ 0.04
Lhx1P63006 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC15.32■□□□□ 0.04
Lhx1P63006 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 E430018J23Rik-201ENSMUST00000074249 2063 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Tmco1-204ENSMUST00000195015 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Lhx1P63006 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Zfp821-203ENSMUST00000212000 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Lhx1P63006 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Dusp13-208ENSMUST00000183698 1019 ntTSL 5 BASIC15.31■□□□□ 0.04
Lhx1P63006 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC15.31■□□□□ 0.04
Lhx1P63006 Gm9682-201ENSMUST00000197505 556 ntBASIC15.31■□□□□ 0.04
Lhx1P63006 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC15.31■□□□□ 0.04
Lhx1P63006 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lhx1P63006 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.3■□□□□ 0.04
Lhx1P63006 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
Lhx1P63006 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Lhx1P63006 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lhx1P63006 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.7 ms