Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Gm11249-201ENSMUST00000117071 859 ntBASIC14.24□□□□□ -0.13
Vbp1P61759 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.24□□□□□ -0.13
Vbp1P61759 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Vbp1P61759 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Vbp1P61759 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Vbp1P61759 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC14.23□□□□□ -0.13
Vbp1P61759 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
Vbp1P61759 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Mettl7a1-201ENSMUST00000067752 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm21596-201ENSMUST00000178049 1316 ntBASIC14.23□□□□□ -0.13
Vbp1P61759 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Vbp1P61759 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm36967-201ENSMUST00000193814 266 ntBASIC14.23□□□□□ -0.13
Vbp1P61759 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vbp1P61759 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.23□□□□□ -0.13
Vbp1P61759 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.23□□□□□ -0.13
Vbp1P61759 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Vbp1P61759 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Vbp1P61759 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vbp1P61759 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Vbp1P61759 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Rtf1-201ENSMUST00000028767 4664 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vbp1P61759 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Vbp1P61759 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vbp1P61759 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vbp1P61759 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vbp1P61759 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Vbp1P61759 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.21□□□□□ -0.13
Vbp1P61759 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Zbtb48-201ENSMUST00000066715 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
Vbp1P61759 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.21□□□□□ -0.13
Vbp1P61759 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vbp1P61759 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC14.21□□□□□ -0.13
Vbp1P61759 Gm13158-201ENSMUST00000122007 736 ntBASIC14.21□□□□□ -0.13
Vbp1P61759 Gm12134-201ENSMUST00000122109 520 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms