Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cks1bP61025 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Cks1bP61025 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Morc4-201ENSMUST00000033811 4412 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
Cks1bP61025 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Cks1bP61025 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Cks1bP61025 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Cks1bP61025 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC11.17□□□□□ -0.62
Cks1bP61025 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Cks1bP61025 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.17□□□□□ -0.62
Cks1bP61025 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Gm17661-201ENSMUST00000170317 270 ntBASIC11.17□□□□□ -0.62
Cks1bP61025 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC11.17□□□□□ -0.62
Cks1bP61025 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Cks1bP61025 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.17□□□□□ -0.62
Cks1bP61025 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC11.17□□□□□ -0.62
Cks1bP61025 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cks1bP61025 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Sorbs3-204ENSMUST00000227929 2460 ntBASIC11.17□□□□□ -0.62
Cks1bP61025 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Cks1bP61025 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 AL590614.2-201ENSMUST00000225374 1937 ntBASIC11.17□□□□□ -0.62
Cks1bP61025 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC11.17□□□□□ -0.62
Cks1bP61025 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Cks1bP61025 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.16□□□□□ -0.62
Cks1bP61025 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Gm37292-201ENSMUST00000192062 758 ntBASIC11.16□□□□□ -0.62
Cks1bP61025 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Cks1bP61025 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Cks1bP61025 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Cks1bP61025 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Cks1bP61025 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms