Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox3P53784 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox3P53784 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox3P53784 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.98□□□□□ -0.01
Sox3P53784 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox3P53784 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.98□□□□□ -0.01
Sox3P53784 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Sox3P53784 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Sox3P53784 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Sox3P53784 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Gm44450-201ENSMUST00000199528 114 ntBASIC14.97□□□□□ -0.01
Sox3P53784 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.97□□□□□ -0.01
Sox3P53784 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
Sox3P53784 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Sox3P53784 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.96□□□□□ -0.01
Sox3P53784 Prob1-201ENSMUST00000097619 3021 ntBASIC14.96□□□□□ -0.01
Sox3P53784 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
Sox3P53784 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
Sox3P53784 Gm5648-201ENSMUST00000122244 1587 ntBASIC14.96□□□□□ -0.01
Sox3P53784 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.96□□□□□ -0.01
Sox3P53784 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Sox3P53784 Gm27628-201ENSMUST00000184911 107 ntBASIC14.96□□□□□ -0.01
Sox3P53784 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.96□□□□□ -0.01
Sox3P53784 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Sox3P53784 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC14.96□□□□□ -0.02
Sox3P53784 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox3P53784 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox3P53784 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Sox3P53784 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Sox3P53784 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC14.95□□□□□ -0.02
Sox3P53784 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
Sox3P53784 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.95□□□□□ -0.02
Sox3P53784 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Chchd1-203ENSMUST00000224633 557 ntBASIC14.95□□□□□ -0.02
Sox3P53784 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Sox3P53784 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms