Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.7□□□□□ -0.06
Sox2P48432 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Sox2P48432 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sox2P48432 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.69□□□□□ -0.06
Sox2P48432 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sox2P48432 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Hmgb3-204ENSMUST00000114582 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Hmgb3-203ENSMUST00000088874 1728 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Sox2P48432 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Sox2P48432 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sox2P48432 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 H2-K1-201ENSMUST00000025181 1605 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC14.68□□□□□ -0.06
Sox2P48432 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox2P48432 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Sox2P48432 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Sox2P48432 Sox1ot-202ENSMUST00000186174 7420 ntTSL 5 BASIC14.68□□□□□ -0.06
Sox2P48432 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Sox2P48432 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Gm9768-201ENSMUST00000206007 2861 ntBASIC14.67□□□□□ -0.06
Sox2P48432 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC14.67□□□□□ -0.06
Sox2P48432 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Gm10812-201ENSMUST00000099864 546 ntBASIC14.67□□□□□ -0.06
Sox2P48432 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Sox2P48432 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Sox2P48432 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox2P48432 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox2P48432 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox2P48432 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.66□□□□□ -0.06
Sox2P48432 Gm13436-201ENSMUST00000120418 567 ntBASIC14.66□□□□□ -0.06
Sox2P48432 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox2P48432 Mir1668-201ENSMUST00000184114 107 ntBASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms