Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Xcl1P47993 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Xcl1P47993 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC10.21□□□□□ -0.78
Xcl1P47993 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Xcl1P47993 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC10.2□□□□□ -0.78
Xcl1P47993 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC10.2□□□□□ -0.78
Xcl1P47993 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC10.2□□□□□ -0.78
Xcl1P47993 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC10.2□□□□□ -0.78
Xcl1P47993 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Xcl1P47993 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Xcl1P47993 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Xcl1P47993 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Card9-202ENSMUST00000100303 1947 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Xcl1P47993 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.19□□□□□ -0.78
Xcl1P47993 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Xcl1P47993 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC10.19□□□□□ -0.78
Xcl1P47993 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Smad6-203ENSMUST00000179458 273 ntBASIC10.19□□□□□ -0.78
Xcl1P47993 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC10.19□□□□□ -0.78
Xcl1P47993 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Xcl1P47993 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Xcl1P47993 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Xcl1P47993 Gm37691-201ENSMUST00000192147 2573 ntBASIC10.19□□□□□ -0.78
Xcl1P47993 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Xcl1P47993 Gm38391-201ENSMUST00000191720 4069 ntBASIC10.18□□□□□ -0.78
Xcl1P47993 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms